== Continuity Developer Information == === TO DO Lists === * [:/Reengineering: Continuity 7.0 Re-engineering plan] * [:/TaskList: Task List] * [:/FuturePlans: Future Plans] === Obtaining, Compiling, and Understanding the Source code === * [:/CheckingOutSourceFromGit: Obtaining the source from Git] (Currently for collaborators only!) * [:/BlenderMigrationSetup: Setup blender_migration branch] * [:/CompilingContinuity: Compiling Continuity from source] * [:/UnderstandingTheSource: Understanding the Continuity source] * [:/VariableDescriptions: Description of Continuity Variables] * [:/ScriptDescriptions: Description of Continuity Scripts] * [:/AddingUnitTypes: How to edit unit types for a model editor] * [:/ContinuityParallel: Architecture of Continuity Parallel] * [:/Cont6Files: Anatomy of Continuity 6 Files] * [:/Cont6Solvers: Solvers used by Continuity 6] * [:/NumpyBug: Fixing the f2py problem ] * [:/BuildingDistributedSuperLU: Building Distributed SuperLU] * [:/Cont6Batch: Running in batch mode] * [:/AddingDynamicCompiledModelBinaries: Adding dynamically-compiled model binaries to the SVN Repository] * [:/MakingExtentionsInC: Creating a C Extension] * [:/DynamicsModel: Dynamics Model] * [:/BasisFunctionRefactor: Basis Function Refactor] * [:/WrappingFortran: Instructions for wrapping Fortran codes with F2py] * [:/UpdatingTests: Updating test cases] * [:/ModelCompilation: Overview of the source code generation process] * [:/CodeProfiling: Profiling the source code] === Database Information === * [:/DatabaseDev: Database development] * [:/BasicDatabaseInstallationInstructions: Basic Database Installation] * [:/HowTo...Guides: How to do things on the database] * [:/ExportGuide: How to export finite element geometries from the database] === Tools and Libraries === * [:/AdvancedInstallerSetup: Creating the Continuity installer with Advanced Installer] * [:/InstallShieldSetup: Creating the Continuity installer with Installshield **We no longer use this**] * [:/CompilingITK: Compiling Insight Toolkit (ITK) on Windows] * [:/CompilingITKLinux: Compiling Insight Toolkit (ITK) on Linux] * [:/CudaDocs: Running with CUDA] * [:/OpenMP: Using OpenMP] * [:/PETSc: Using PETSc] * [:/PyTrilinos: Installing PyTrilinos (linux only)] * [:/OpenNurbs: Using OpenNurbs] * [:/WiX: Using the WiX installation system] * [:/CompactMgltools: Packages removed from MglTools] * [:/UpdatingMgltools: How to make changes to MglTools packages] === Misc. Notes === * [:/Blender: Documentation for the HexBlender plug-in for Blender 2.49b] * [:/Webservices: Setting up a web service] * [:/ExportingContinuity: Accessing the source from an off campus machine] * [:/UpdatingGraphicsDrivers: Updating NVIDIA graphics drivers on lys] * [:/UpgradingPython: Upgrading to python 2.5] * [attachment:SciTEGlobal.properties Recommended SciTE settings] * [:/TextEditors: Text editors that work well with Continuity] * [:/SystemSetup: Setting up a new system] * [:/Afni: Using AFNI diffusion plugin] * [:/Windows7: Working with Windows 7] * [:/AddingReadlineToMac: Adding readline support to Mac] * [:/BuildingPythonOnMac: Building Python 2.5, NumPy and SciPy on Mac OS X 10.6] * [:/ContinuityWebsite: Miscellaneous notes on the Continuity website] * [:/PMWNotes: Notes on modifying PMW widgets] * [attachment:tableFiles.zip Various example table files] * [:/InterfacesNotes: Miscellaneous notes on the Interfaces website] * [:/SwigInstantNotes: Miscellaneous notes on using Swing/Instant to compile models] * [:/BuildAndTestNotes: Notes on Continuity's Automated Build and Test System] * [:/EPpath: A map of the EP workflow] * [:/EPIonicMarkovModel: Creating Markov model type ion channels in the EP ionic model editor] * [:/SympyTutorial: A guide for sympy syntax in Continuity] * [:/DebuggingBasics: Some basics on how to debug in Python] === Obsolete Information === * [:/SwiginacInstallation: Installing Swiginac] * [http://continuity.nbcr.net Old Continuity site hosted by nbcr]